The detailed information of tRNA gene sequence


Sequence ID>WENV170014087
Genome IDAVFP01006561
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 927
End posion on genome 852
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ggagcgctat
tRNA gene sequence 
AGGGGTATAGCTCAGCCGGTAGAGCGGCGGTCTCCAAAACCGCAGGTCGCGGGTTCGAAT
CCTGCTGCCCCTGCCA
Downstream region at tRNA end position 
cggcccgcgc
Secondary structure (Cloverleaf model)
>WENV170014087	Trp	CCA
                   t      GCCA cggcccgcgc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T A
                    T     C G T C C     A
      C G A        A      | | + | |     G
    C       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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