The detailed information of tRNA gene sequence


Sequence ID>WENV170014089
Genome IDAVFP01006633
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 452
End posion on genome 538
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agagaaaaat
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGTAATGGAGCAGATTGCTAATCTGTCAACGCGTAAGTGTTGCC
CGGGTTCGAATCCCGGTCTCTCCGCCT
Downstream region at tRNA end position 
tcgcccgctg
Secondary structure (Cloverleaf model)
>WENV170014089	Ser	GCT
                   t      GCCT tcgcccgctg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G G C C C     A
        G A        G      | | | | |     G
      T     G A C C       C C G G G     C
      G       | | |                 T T
      G     A T G G
        T A        A     CAACGCGTAAGTGTTGC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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