The detailed information of tRNA gene sequence


Sequence ID>WENV170014101
Genome IDAVFP01007994
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 677
End posion on genome 764
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
gcccccctgT
tRNA gene sequence 
GCCGAAGTGGCGGAATTGGTAGACGCGACGGATTCAAAATCCGTTACTTAATTGCGAGTG
TGAGGGTTCGAGTCCCTCCTTCGGTATtt
Downstream region at tRNA end position 
ttcaggtgca
Secondary structure (Cloverleaf model)
>WENV170014101	Leu	CAA
                   T      ATtt ttcaggtgca
                     G + T
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T A A        G      | | | | |     G
    T       G G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TACTTAATTGCGAGTGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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