The detailed information of tRNA gene sequence


Sequence ID>WENV170014108
Genome IDAVFP01008503
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 460
End posion on genome 533
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
accacaggac
tRNA gene sequence 
GGCGCTATGGCGGAGTGGTGACGCAGCGGATTGCAAATCCGTGTACCCCGGTTCGATTCC
GGGTGGCGCCTCCA
Downstream region at tRNA end position 
ctcttttcca
Secondary structure (Cloverleaf model)
>WENV170014108	Cys	GCA
                   c      TCCA ctcttttcca
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T + G
                     A - T          T T
                    T     G G G C C     A
        G A        G      | | | | |     G
      T     G G C G       C C C G G     C
      G       | | |                 T T
      G     A C G C
        T G        A     GTAC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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