The detailed information of tRNA gene sequence


Sequence ID>WENV170014119
Genome IDAVFP01011933
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 642
End posion on genome 565
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tgcgccccgt
tRNA gene sequence 
CGGGCCGTGGCGCAGCCTGGTTAGCGCGTCCGTCTGGGGGACGGAAGGTCGTGAGTTCGA
ATCTCGCCGGCCCGACCA
Downstream region at tRNA end position 
atcgaccgga
Secondary structure (Cloverleaf model)
>WENV170014119	Pro	GGG
                   t      ACCA atcgaccgga
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     C G C T C     A
    C C G A        G      | + | | |     G
  T         C G C G       G T G A G     C
  G         | | | |                 T T
  G         G C G C
    T T A          G     AGGTC
                    T - A
                    C - G
                    C - G
                    G - C
                    T - A
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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