The detailed information of tRNA gene sequence


Sequence ID>WENV170014126
Genome IDAVFP01013755
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 311
End posion on genome 384
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aattttatac
tRNA gene sequence 
AGGCCTGTGGCTCAATTGGCAGAGCATCGGTCTCCAAAACCGAGGGTTGGGGGTTCGAGT
CCCTCCAGGCCTGCat
Downstream region at tRNA end position 
ttttgttaaa
Secondary structure (Cloverleaf model)
>WENV170014126	Trp	CCA
                   c      GCat ttttgttaaa
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     C T C C C     A
      T A A        G      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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