The detailed information of tRNA gene sequence


Sequence ID>WENV170014154
Genome IDAVFP01027417
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 239
End posion on genome 327
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
gtaccgtcat
tRNA gene sequence 
GCCTCGGTGGTGGAACAGGTAGACACCAGGGACTTAAAATCCCTTGGGCCATTGCGCCCG
TGCGAGTTCGACTCTCGCCCGAGGCACCA
Downstream region at tRNA end position 
tttccgnnnn
Secondary structure (Cloverleaf model)
>WENV170014154	Leu	TAA
                   t      ACCA tttccgnnnn
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C          T C
                    T     C G C T C     A
      C A A        G      | | | | |     G
    A       G G T G       G C G A G     C
    G         | | |                 T T
    G       A C A C
      T A G        C     TGGGCCATTGCGCCCGT
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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