The detailed information of tRNA gene sequence


Sequence ID>WENV170014159
Genome IDAVFP01030934
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 74
End posion on genome 149
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
atctgattcc
tRNA gene sequence 
GGGGGTGTAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCATCGGTTCGAAC
CCGTTCACCTCCACCA
Downstream region at tRNA end position 
ggcagataca
Secondary structure (Cloverleaf model)
>WENV170014159	Ala	TGC
                   c      ACCA ggcagataca
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T - A
                     G - C          C A
                    T     T T G C C     A
      C G A        A      |   | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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