The detailed information of tRNA gene sequence


Sequence ID>WENV170014233
Genome IDAXCI01002554
Search identical group
Phylum/Class[AXCI] groundwater metagenome; Mt. Simon Sandstone pore water sample D5872 at 1.8km depth, Illinois-Basin Decatur Project
Species
Start position on genome 2789
End posion on genome 2713
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cacgcttttc
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGTCAGAGCAGGGGACTCATAATCCCTTGGTCGTAGGTTCAAG
TCCTACTGGGCCCACCA
Downstream region at tRNA end position 
ttcttgcttg
Secondary structure (Cloverleaf model)
>WENV170014233	Met	CAT
                   c      ACCA ttcttgcttg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     C A T C C     A
      T G A        A      | | | | |     A
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     TGGTC
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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