The detailed information of tRNA gene sequence


Sequence ID>WENV170014304
Genome IDAYRE01000002
Search identical group
Phylum/Class[AYRE] bioreactor metagenome; day 6 sample from continuous culture bioreactor with low C:N ratio inoculated with sediment
Species
Start position on genome 59688
End posion on genome 59614
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttactatatt
tRNA gene sequence 
GGGAACGTAGTATAACCTGGCTAGAATAAGCGGCTCCAACCCGCTGGATGGGGGTTCAAA
TCCTTCCGTTCTCACtt
Downstream region at tRNA end position 
ttctaaaaaa
Secondary structure (Cloverleaf model)
>WENV170014304	Trp	CCA
                   t      ACtt ttctaaaaaa
                     G - C
                     G + T
                     G - C
                     A - T
                     A - T
                     C - G
                     G - C          T A
                    T     C T T C C     A
    C C A A        A      | + + | |     A
  T         T A T G       G G G G G     C
  G         +   | +                 T T
  G         G A A T
    C T A          A     GGAT
                    A - T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       C
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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