The detailed information of tRNA gene sequence


Sequence ID>WENV170014312
Genome IDAYRE01000014
Search identical group
Phylum/Class[AYRE] bioreactor metagenome; day 6 sample from continuous culture bioreactor with low C:N ratio inoculated with sediment
Species
Start position on genome 3301
End posion on genome 3226
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
catatatatt
tRNA gene sequence 
GTGGCTTTGGTGTAGCTTGGCCTATCATCGGGCGTTTGGGACGCCTGGACCCAGGTTCAA
ATCCTGGAAGCCACGCtt
Downstream region at tRNA end position 
ttttacaatt
Secondary structure (Cloverleaf model)
>WENV170014312	Pro	TGG
                   t      GCtt ttttacaatt
                     G - C
                     T - A
                     G - C
                     G - C
                     C - G
                     T - A
                     T - A          T A
                    T     G G T C C     A
    T C G A        G      | | | | |     A
  T         T G T G       C C A G G     C
  G           | | +                 T T
  G         T C A T
    C C T A        C     GGAC
                    G + T
                    G - C
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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