The detailed information of tRNA gene sequence


Sequence ID>WENV170014319
Genome IDAYRE01000042
Search identical group
Phylum/Class[AYRE] bioreactor metagenome; day 6 sample from continuous culture bioreactor with low C:N ratio inoculated with sediment
Species
Start position on genome 4663
End posion on genome 4737
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tagagtttat
tRNA gene sequence 
GTCGACCTAGCTCAGTTGGTTAGAGTGCTGGATTCATACTCCAGAGGTCCGGAGTTCAAA
TCTCCGGGTCGACACtt
Downstream region at tRNA end position 
tttattgtta
Secondary structure (Cloverleaf model)
>WENV170014319	Met	CAT
                   t      ACtt tttattgtta
                     G - C
                     T - A
                     C - G
                     G - C
                     A - T
                     C - G
                     C - G          T A
                    T     G C C T C     A
      T G A        A      | | | | |     A
    T       C T C G       C G G A G     C
    G       | | | +                 T T
    G       G A G T
      T T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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