The detailed information of tRNA gene sequence


Sequence ID>WENV170014323
Genome IDAYRE01000140
Search identical group
Phylum/Class[AYRE] bioreactor metagenome; day 6 sample from continuous culture bioreactor with low C:N ratio inoculated with sediment
Species
Start position on genome 3585
End posion on genome 3510
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
agtttattat
tRNA gene sequence 
CCTCCTTTAGTGTAGTCCGGCCTATCATCTCGGACTTTCGATCCGATGACCTGGGTTCAA
ATCCCGGAAGGAGGGCtt
Downstream region at tRNA end position 
ttttatattc
Secondary structure (Cloverleaf model)
>WENV170014323	Glu	TTC
                   t      GCtt ttttatattc
                     C - G
                     C - G
                     T - A
                     C - G
                     C - G
                     T - A
                     T - A          T A
                    T     G G C C C     A
    C T G A        A      | + | | |     A
  C         T G T G       C T G G G     C
  G           | | +                 T T
  G         T C A T
    C C T A        C     TGAC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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