The detailed information of tRNA gene sequence


Sequence ID>WENV170014329
Genome IDAYRE01000722
Search identical group
Phylum/Class[AYRE] bioreactor metagenome; day 6 sample from continuous culture bioreactor with low C:N ratio inoculated with sediment
Species
Start position on genome 2530
End posion on genome 2612
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agagttcatt
tRNA gene sequence 
GCCCATATCGCATAATCCGGTATTGCGCCAGACTTGAAATCTGGTTCCCATGGAATTGGC
GGTTCAAATCCGTCTGTGGGCGCtc
Downstream region at tRNA end position 
tttttataca
Secondary structure (Cloverleaf model)
>WENV170014329	Ser	TGA
                   t      GCtc tttttataca
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     T + G
                     A - T          T A
                    T     C T G C C     A
      T A A        C      | + | | |     A
    C       T A C G       G G C G G     C
    C         | | |                 T T
    G       T T G C
      G T A        G     TTCCCATGGAATT
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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