The detailed information of tRNA gene sequence


Sequence ID>WENV170014335
Genome IDAYRE01001125
Search identical group
Phylum/Class[AYRE] bioreactor metagenome; day 6 sample from continuous culture bioreactor with low C:N ratio inoculated with sediment
Species
Start position on genome 1745
End posion on genome 1837
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tccgcaagac
tRNA gene sequence 
GGTGAGGTGGCCGAGAGGCCGAAGGCGCTCCCCTGCTAAGGGAGTATGTGGTTTATAGCC
GCATCGAGGGTTCGAATCCCTCCCTCACCGCCA
Downstream region at tRNA end position 
tttcttgcac
Secondary structure (Cloverleaf model)
>WENV170014335	Ser	GCT
                   c      GCCA tttcttgcac
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     TATGTGGTTTATAGCCGCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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