The detailed information of tRNA gene sequence


Sequence ID>WENV170014338
Genome IDAYRE01002699
Search identical group
Phylum/Class[AYRE] bioreactor metagenome; day 6 sample from continuous culture bioreactor with low C:N ratio inoculated with sediment
Species
Start position on genome 827
End posion on genome 751
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
nnnnnnnnna
tRNA gene sequence 
GGGCGATTAGCTCAGTTGGTTAGAGCACTGTGTTGATAACGCAGGGGTCCCAAGTTCAAG
TCTTGGATCGCCCACCA
Downstream region at tRNA end position 
ttaaaaaagt
Secondary structure (Cloverleaf model)
>WENV170014338	Ile	GAT
                   a      ACCA ttaaaaaagt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T G
                    T     G G T T C     A
      T G A        A      | | | | |     A
    T       C T C G       C C A A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    T + G
                    G - C
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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