The detailed information of tRNA gene sequence


Sequence ID>WENV170014341
Genome IDAYRE01003468
Search identical group
Phylum/Class[AYRE] bioreactor metagenome; day 6 sample from continuous culture bioreactor with low C:N ratio inoculated with sediment
Species
Start position on genome 246
End posion on genome 157
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gaaaacatac
tRNA gene sequence 
GGACAGTTGGGTGAGTGGCTGAAACCACATCCCTGCTAAGGATGCGTACTGGCAACGGTA
CCGAGGGTTCAAATCCCTCACTGTCCGCCA
Downstream region at tRNA end position 
ttgtttatga
Secondary structure (Cloverleaf model)
>WENV170014341	Ser	GCT
                   c      GCCA ttgtttatga
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      T G A        G      | | | | |     A
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACTGGCAACGGTACC
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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