The detailed information of tRNA gene sequence


Sequence ID>WENV170014343
Genome IDAYRE01003834
Search identical group
Phylum/Class[AYRE] bioreactor metagenome; day 6 sample from continuous culture bioreactor with low C:N ratio inoculated with sediment
Species
Start position on genome 442
End posion on genome 517
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
agttagcact
tRNA gene sequence 
AGGCCAGTGGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGGGGGTTCGAGT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
actcnnnnnn
Secondary structure (Cloverleaf model)
>WENV170014343	Trp	CCA
                   t      GCCA actcnnnnnn
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T A A        G      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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