The detailed information of tRNA gene sequence


Sequence ID>WENV170014344
Genome IDAYRE01004407
Search identical group
Phylum/Class[AYRE] bioreactor metagenome; day 6 sample from continuous culture bioreactor with low C:N ratio inoculated with sediment
Species
Start position on genome 428
End posion on genome 340
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
AGAGAGTTGACAGAGTTGGTCGAATGTACCGGTTTTGAAAACCGGCGAGGTTCACGCCTC
CGGGGGTTCGAATCCCCCACTCTCTGCCA
Downstream region at tRNA end position 
taatttaaat
Secondary structure (Cloverleaf model)
>WENV170014344	Ser	TGA
                   n      GCCA taatttaaat
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C C C C C     A
    T T G A        G      | | | | |     G
  G         G A C A       G G G G G     C
  G           | | |                 T T
  T         A T G T
    C G A          A     CGAGGTTCACGCCTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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