The detailed information of tRNA gene sequence


Sequence ID>WENV170014346
Genome IDAYRE01005248
Search identical group
Phylum/Class[AYRE] bioreactor metagenome; day 6 sample from continuous culture bioreactor with low C:N ratio inoculated with sediment
Species
Start position on genome 99
End posion on genome 191
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taatgaatta
tRNA gene sequence 
GGTGAGGTGGCCGAGTGGCCGAAGGCGCTCCCCTGCTAAGGGAGTATGTGGTTTGTAGCC
GCATCGAGGGTTCGAATCCCTCCCTCACCGCCA
Downstream region at tRNA end position 
ttcattacag
Secondary structure (Cloverleaf model)
>WENV170014346	Ser	GCT
                   a      GCCA ttcattacag
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     TATGTGGTTTGTAGCCGCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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