The detailed information of tRNA gene sequence


Sequence ID>WENV170014356
Genome IDAYRE01006045
Search identical group
Phylum/Class[AYRE] bioreactor metagenome; day 6 sample from continuous culture bioreactor with low C:N ratio inoculated with sediment
Species
Start position on genome 246
End posion on genome 162
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
nnnnnnnngt
tRNA gene sequence 
GGAGGGGTTCCCGAGTGGCCAAAGGGATCAGACTGTAAATCTGACGGCTCAGCCTTCGCT
GGTTCGAATCCAGCTCCCTCCACCA
Downstream region at tRNA end position 
tctatatgtt
Secondary structure (Cloverleaf model)
>WENV170014356	Tyr	GTA
                   t      ACCA tctatatgtt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C G A C C     A
      T G A        T      | | | | |     G
    G       G C C C       G C T G G     C
    G         | | |                 T T
    C       A G G G
      C A A        A     CGGCTCAGCCTTC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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