The detailed information of tRNA gene sequence


Sequence ID>WENV170014528
Genome IDAYRH01001015
Search identical group
Phylum/Class[AYRH] bioreactor metagenome; day 46 sample from continuous culture bioreactor with low C:N ratio inoculated with sediment
Species
Start position on genome 1064
End posion on genome 1139
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
agcgcgcagt
tRNA gene sequence 
AGGGGTATAGCTCAGTTGGTAGAGCGACGGTCTCCAAAACCGTAGGCCCACAGTTCGAGT
CTGTGTGCCCCTGCCA
Downstream region at tRNA end position 
ttatcaccaa
Secondary structure (Cloverleaf model)
>WENV170014528	Trp	CCA
                   t      GCCA ttatcaccaa
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T G
                    T     G T G T C     A
      T G A        A      | | | | |     G
    T       C T C G       C A C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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