The detailed information of tRNA gene sequence


Sequence ID>WENV170014543
Genome IDAYRH01002941
Search identical group
Phylum/Class[AYRH] bioreactor metagenome; day 46 sample from continuous culture bioreactor with low C:N ratio inoculated with sediment
Species
Start position on genome 763
End posion on genome 674
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGAGAGTTGCCGGAGTGGTCGAACGGGGCGGTCTCGAAAACCGTTGAGCGCGCAAGCGTT
CCGAGGGTTCGAATCCCTCACTCTCCGCCA
Downstream region at tRNA end position 
tttttattca
Secondary structure (Cloverleaf model)
>WENV170014543	Ser	CGA
                   n      GCCA tttttattca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G A G G G     C
    G         | | |                 T T
    T       A C G G
      C G A        G     TGAGCGCGCAAGCGTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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