The detailed information of tRNA gene sequence


Sequence ID>WENV170014813
Genome IDAZIB01002328
Search identical group
Phylum/Class[AZIB] marine sediment metagenome; sample MGS-HAV from oil contaminated site at the Gulf of Genoa where a Haven tanker sank in
Species
Start position on genome 145
End posion on genome 61
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgacattttT
tRNA gene sequence 
GCCGAGGTAGTCTAGCGGTATGGCGCAAGCTTGGAAAGCTTGTGGGGCTTGACCCCTCGG
GAGTTCGAATCTCCCCCTCGGCGTat
Downstream region at tRNA end position 
aattcttttt
Secondary structure (Cloverleaf model)
>WENV170014813	Ser	GGA
                   T      GTat aattcttttt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
        G A        A      | | | | |     G
      C     T C T G       G G G A G     C
      G       | + |                 T T
      G     T G G C
        T A        G     TGGGGCTTGACCCCTC
                    C - G
                    A - T
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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