The detailed information of tRNA gene sequence


Sequence ID>WENV170014825
Genome IDAZIB01004405
Search identical group
Phylum/Class[AZIB] marine sediment metagenome; sample MGS-HAV from oil contaminated site at the Gulf of Genoa where a Haven tanker sank in
Species
Start position on genome 3148
End posion on genome 3072
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
aagtcttagt
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTAGCGCACCACAATGGGGTTGTGGGGGTCGAGTGTTCAAA
TCACTCCGTCCCGACCA
Downstream region at tRNA end position 
ttttcaaatt
Secondary structure (Cloverleaf model)
>WENV170014825	Pro	GGG
                   t      ACCA ttttcaaatt
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C          T A
                    T     C T C A C     A
      C G A        A      | | | | |     A
    C       C G C G       G A G T G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    A - T
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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