The detailed information of tRNA gene sequence


Sequence ID>WENV170014854
Genome IDAZIC01001077
Search identical group
Phylum/Class[AZIC] marine sediment metagenome; sample MGS-MES from oil contaminated site at the harbour of Messina (Sicily, Italy)
Species
Start position on genome 232
End posion on genome 304
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
gttcactttt
tRNA gene sequence 
GCCTCTGTGGCTTAGCGGTATAGCGGCTGATTCGTAATCAGCAGGCCGAGGGTTCGAATC
TCTCCAGGGGCTCtt
Downstream region at tRNA end position 
ttttcacaat
Secondary structure (Cloverleaf model)
>WENV170014854	Thr	CGT
                   t      TCtt ttttcacaat
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G
                     T - A
                     G - C          T A
                    T     C T C T C     A
        G A        G      | | | + |     G
      C     T T C G       G A G G G     C
      G       | | |                 T T
      G     T A G C
        T A        G     AGGCC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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