The detailed information of tRNA gene sequence


Sequence ID>WENV170015057
Genome IDAZID01000010
Search identical group
Phylum/Class[AZID] marine sediment metagenome; sample MGS-BIZ from oil contaminated site at the Bizerte lagoon located in Northern Tunisia
Species
Start position on genome 363
End posion on genome 287
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aactggcaat
tRNA gene sequence 
CGGGGCATGGCGCAGTCTGGTAGCGCAACTGCTTTGGGAGCAGTGGGTCGGCGGTTCGAA
TCCGTCTGCCCCGACCA
Downstream region at tRNA end position 
cccggtctcc
Secondary structure (Cloverleaf model)
>WENV170015057	Pro	TGG
                   t      ACCA cccggtctcc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     C T G C C     A
      T G A        G      | + | | |     G
    C       C G C G       G G C G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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