The detailed information of tRNA gene sequence


Sequence ID>WENV170015070
Genome IDAZID01001287
Search identical group
Phylum/Class[AZID] marine sediment metagenome; sample MGS-BIZ from oil contaminated site at the Bizerte lagoon located in Northern Tunisia
Species
Start position on genome 1359
End posion on genome 1269
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gacagaatta
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTTTAAGGTGCCCGCCTGGAAAGCGGGTGTACGGTGATACCGT
ACCGCGGGTTCAAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
gaacgaaaaa
Secondary structure (Cloverleaf model)
>WENV170015070	Ser	GGA
                   a      GCCA gaacgaaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     A
    G       G T C G       G C G G G     C
    G         + | +                 T T
    T       A G G T
      T T A        G     TGTACGGTGATACCGTACC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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