The detailed information of tRNA gene sequence


Sequence ID>WENV170015094
Genome IDAZID01003904
Search identical group
Phylum/Class[AZID] marine sediment metagenome; sample MGS-BIZ from oil contaminated site at the Bizerte lagoon located in Northern Tunisia
Species
Start position on genome 1021
End posion on genome 929
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
cctcattccc
tRNA gene sequence 
GGAGGCGACCGAGCGCCTGGTGGGCTCCCCGGTCTTCAAAACCGGTGGGGGGTCGAAAGG
TCCCCGGCGGGTTCGATTCCCGTCCGCCTCCGCta
Downstream region at tRNA end position 
ttgctgtcct
Secondary structure (Cloverleaf model)
>WENV170015094	SeC(p)	TCA
                   c      GCta ttgctgtcct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     A   C          T T
                    C     T G C C C     A
      C C G        C      + | | | |     G
    T       C G A G       G C G G G     C
    G       | | | |                 T T
    G       G C T C
      T G G        C     TGGGGGGTCGAAAGGTCCCCG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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