The detailed information of tRNA gene sequence


Sequence ID>WENV170015108
Genome IDAZID01012651
Search identical group
Phylum/Class[AZID] marine sediment metagenome; sample MGS-BIZ from oil contaminated site at the Bizerte lagoon located in Northern Tunisia
Species
Start position on genome 143
End posion on genome 232
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tagagtaaat
tRNA gene sequence 
GGTAGGGTGGCAGAGTGGTCGATTGCGCACGCTTGGAAAGTGTGTGAACCTTAACCGGTT
CCGTGAGTTCGAATCTCACCCCTACCGCCA
Downstream region at tRNA end position 
aacagagaat
Secondary structure (Cloverleaf model)
>WENV170015108	Ser	GGA
                   t      GCCA aacagagaat
                     G - C
                     G - C
                     T - A
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G A G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGAACCTTAACCGGTTCC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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