The detailed information of tRNA gene sequence


Sequence ID>WENV170015153
Genome IDAZIE01003009
Search identical group
Phylum/Class[AZIE] marine sediment metagenome; sample MGS-MCh from oil contaminated site at the lagoon of Mar Chica, located in the north-west
Species
Start position on genome 10178
End posion on genome 10091
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cttaaactcC
tRNA gene sequence 
GGAAAGGTGACTGAGTGGTTTAAGGTGTTAGTTTGCTAAACTAAAGTATTGTTTAAGTAC
CGTGGGTTCGAATCCCATCTTTTCCGAaa
Downstream region at tRNA end position 
aaatttttag
Secondary structure (Cloverleaf model)
>WENV170015153	Ser	GCT
                   C      GAaa aaatttttag
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G + T
                     G - C          T A
                    T     T A C C C     A
      T G A        G      + | | | |     G
    G       G T C A       G T G G G     C
    G         + | |                 T T
    T       A G G T
      T T A        G     AGTATTGTTTAAGTACC
                    T - A
                    T - A
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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