The detailed information of tRNA gene sequence


Sequence ID>WENV170015154
Genome IDAZIE01003009
Search identical group
Phylum/Class[AZIE] marine sediment metagenome; sample MGS-MCh from oil contaminated site at the lagoon of Mar Chica, located in the north-west
Species
Start position on genome 9223
End posion on genome 9149
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttaaaataa
tRNA gene sequence 
GACAAAATAGCTCAGTTTGGTTAGAGCGGTGGAATCATAATCCATAGGTCGTGAGTTCGA
GTCTCACTTTTGTCAgct
Downstream region at tRNA end position 
ttttttttta
Secondary structure (Cloverleaf model)
>WENV170015154	Met	CAT
                   a      Agct ttttttttta
                     G - C
                     A - T
                     C - G
                     A - T
                     A - T
                     A - T
                     A - T          T G
                    T     C A C T C     A
    T T G A        A      | | | | |     G
  T         C T C G       G T G A G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     AGGTC
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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