The detailed information of tRNA gene sequence


Sequence ID>WENV170015238
Genome IDAZIF01000018
Search identical group
Phylum/Class[AZIF] marine sediment metagenome; sample MGS-PRI from oil contaminated site at the harbour of Priolo Gargallo (Siracusa, Italy)
Species
Start position on genome 5591
End posion on genome 5518
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aagaaggagc
tRNA gene sequence 
GCCGAGGTGTCAGAGTGGCTATGTAACCGGCTGCAGACCGGTTTATGGGGGTTCAAATCC
CTCCCTCGGCTCCT
Downstream region at tRNA end position 
tttatatgtg
Secondary structure (Cloverleaf model)
>WENV170015238	Cys	GCA
                   c      TCCT tttatatgtg
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
        G A        G      | + | | |     A
      T     G A C T       G G G G G     C
      G       | |                   T T
      G     A T G T
        C T        A     TTAT
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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