The detailed information of tRNA gene sequence


Sequence ID>WENV170015244
Genome IDAZIF01000180
Search identical group
Phylum/Class[AZIF] marine sediment metagenome; sample MGS-PRI from oil contaminated site at the harbour of Priolo Gargallo (Siracusa, Italy)
Species
Start position on genome 19524
End posion on genome 19608
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaacatgtga
tRNA gene sequence 
GCCGAGGTGGCCCAGTCTGGTACGGCGCAGGCCTGCTAAGTCTGTGGGCGCAAGCCCTCC
AGGGTTCAAATCCCTGCCTCGGCGCtc
Downstream region at tRNA end position 
ttttatctca
Secondary structure (Cloverleaf model)
>WENV170015244	Ser	GCT
                   a      GCtc ttttatctca
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
      T G A        G      | | | | |     A
    C       C C C G       C A G G G     C
    T         | | |                 T T
    G       C G G C
      G T A        G     TGGGCGCAAGCCCTC
                    C - G
                    A - T
                    G - C
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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