The detailed information of tRNA gene sequence


Sequence ID>WENV170015247
Genome IDAZIF01000199
Search identical group
Phylum/Class[AZIF] marine sediment metagenome; sample MGS-PRI from oil contaminated site at the harbour of Priolo Gargallo (Siracusa, Italy)
Species
Start position on genome 18756
End posion on genome 18682
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
actatgtaag
tRNA gene sequence 
GCCGGGGTCGCCTAGTGGCTATGGCCGTGGACTGCAGATCCACTCACGTGAGTTCAATTC
TCACCCCCGGCTCCA
Downstream region at tRNA end position 
tctctttctg
Secondary structure (Cloverleaf model)
>WENV170015247	Cys	GCA
                   g      TCCA tctctttctg
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T T
                    T     C A C T C     A
      T G A        C      | | | | |     A
    G       T C C G       G T G A G     C
    G         | | |                 T T
    C       T G G C
      T A          C     TCAC
                    G - C
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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