The detailed information of tRNA gene sequence


Sequence ID>WENV170015253
Genome IDAZIF01000308
Search identical group
Phylum/Class[AZIF] marine sediment metagenome; sample MGS-PRI from oil contaminated site at the harbour of Priolo Gargallo (Siracusa, Italy)
Species
Start position on genome 29589
End posion on genome 29515
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
taaaacagca
tRNA gene sequence 
GGGCCCGTAGTCTAGTTGGTTATGACGTCGCCCTTACAAGGCGGAGGTCTTGAGTTCGAA
TCTCAACGGGCCCACtt
Downstream region at tRNA end position 
ctccttcgag
Secondary structure (Cloverleaf model)
>WENV170015253	Val	TAC
                   a      ACtt ctccttcgag
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     A A C T C     A
      T G A        A      | | | | |     G
    T       T C T G       T T G A G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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