The detailed information of tRNA gene sequence


Sequence ID>WENV170015264
Genome IDAZIF01000810
Search identical group
Phylum/Class[AZIF] marine sediment metagenome; sample MGS-PRI from oil contaminated site at the harbour of Priolo Gargallo (Siracusa, Italy)
Species
Start position on genome 1615
End posion on genome 1542
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
attacttaaa
tRNA gene sequence 
GGGCCCGTAGTCTAGGTGGTTATGACGTCGCCTTGACAAGGCGGAGGTCTCGAGTTCGAA
TCTCGACGGGCCCAttt
Downstream region at tRNA end position 
tttaatatat
Secondary structure (Cloverleaf model)
>WENV170015264	Val	GAC
                   a      Attt tttaatatat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     A G C T C     A
      G G A        A      | | | | |     G
    T       T C T G       T C G A G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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