The detailed information of tRNA gene sequence


Sequence ID>WENV170015512
Genome IDAZIH01002105
Search identical group
Phylum/Class[AZIH] marine sediment metagenome; enrichment culture of sample MGS-ANC(UA) from oil contaminated site at the Ancona Port
Species
Start position on genome 2300
End posion on genome 2211
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
accgcccacc
tRNA gene sequence 
GGAGCGGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTAGGCGGGAGACCGTC
TCCAGGGTTCGAATCCCTGTCGCTCCGCCA
Downstream region at tRNA end position 
gacccccaaa
Secondary structure (Cloverleaf model)
>WENV170015512	Ser	GGA
                   c      GCCA gacccccaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       C A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGCGGGAGACCGTCTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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