The detailed information of tRNA gene sequence


Sequence ID>WENV170015713
Genome IDAZII01004274
Search identical group
Phylum/Class[AZII] marine sediment metagenome; enrichment culture of sample MGS-BIZ(AMM) from oil contaminated site at the Bizerte
Species
Start position on genome 742
End posion on genome 666
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcaaaattat
tRNA gene sequence 
GGCGAGGTAGCTCAGTCGGTTAGAGCGTCGGATTCATAACCCGGAGGTCACGAGTTCAAT
TCTCGTTCTCGCTACAA
Downstream region at tRNA end position 
caataaaagt
Secondary structure (Cloverleaf model)
>WENV170015713	Met	CAT
                   t      ACAA caataaaagt
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G + T          T T
                    T     T G C T C     A
      T G A        A      | | | | |     A
    C       C T C G       A C G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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