The detailed information of tRNA gene sequence


Sequence ID>WENV170015959
Genome IDAZIJ01005499
Search identical group
Phylum/Class[AZIJ] marine sediment metagenome; enrichment culture of sample MGS-ElMAX(UA) from oil contaminated site at the El-Max
Species
Start position on genome 4024
End posion on genome 4113
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agccgccatt
tRNA gene sequence 
GGAAGCGTGGCAGAGCGGTTTAATGCACCGGTCTTGAAAACCGACGAGGGTGTGAGTCCT
CCGTGAGTTCGAATCTCACCGCTTCCGCCA
Downstream region at tRNA end position 
aatacttaaa
Secondary structure (Cloverleaf model)
>WENV170015959	Ser	TGA
                   t      GCCA aatacttaaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C A C T C     A
      C G A        G      | | | | |     G
    G       G A C G       G T G A G     C
    G         | | |                 T T
    T       A T G C
      T T A        A     CGAGGGTGTGAGTCCTCC
                    C   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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