The detailed information of tRNA gene sequence


Sequence ID>WENV170016035
Genome IDAZIJ01009272
Search identical group
Phylum/Class[AZIJ] marine sediment metagenome; enrichment culture of sample MGS-ElMAX(UA) from oil contaminated site at the El-Max
Species
Start position on genome 416
End posion on genome 340
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
cccgcctagt
tRNA gene sequence 
CGGGGCGTAGCGCAGTCTGGTAGCGCACTTGCATGGGGTGCAAGGGGTCGCAGGTTCAAA
TCCTGCCGTCCCGACCA
Downstream region at tRNA end position 
tttatttgct
Secondary structure (Cloverleaf model)
>WENV170016035	Pro	GGG
                   t      ACCA tttatttgct
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C          T A
                    T     C G T C C     A
      T G A        A      | | | | |     A
    C       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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