The detailed information of tRNA gene sequence


Sequence ID>WENV170016149
Genome IDAZIJ01013091
Search identical group
Phylum/Class[AZIJ] marine sediment metagenome; enrichment culture of sample MGS-ElMAX(UA) from oil contaminated site at the El-Max
Species
Start position on genome 3545
End posion on genome 3469
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
catccatttt
tRNA gene sequence 
GGGCCTATAGCTCAGCTGGATAGAGCGGTCGACTCATAATCGACTGGTCGCAGGTTCGAG
CCCTGCTGGGCCCACCA
Downstream region at tRNA end position 
ttttatagat
Secondary structure (Cloverleaf model)
>WENV170016149	Met	CAT
                   t      ACCA ttttatagat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          C G
                    T     C G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     TGGTC
                    G - C
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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