The detailed information of tRNA gene sequence


Sequence ID>WENV170016181
Genome IDAZIJ01014755
Search identical group
Phylum/Class[AZIJ] marine sediment metagenome; enrichment culture of sample MGS-ElMAX(UA) from oil contaminated site at the El-Max
Species
Start position on genome 9429
End posion on genome 9337
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acggggagct
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCGGCGGTTTGCTAAACCGTTGTACAGTGTAAAGCT
GTACCGTGGGTTCGAATCCCATCCTCTCCGCCA
Downstream region at tRNA end position 
tattttcaat
Secondary structure (Cloverleaf model)
>WENV170016181	Ser	GCT
                   t      GCCA tattttcaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T A C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TGTACAGTGTAAAGCTGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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