The detailed information of tRNA gene sequence


Sequence ID>WENV170016182
Genome IDAZIJ01014957
Search identical group
Phylum/Class[AZIJ] marine sediment metagenome; enrichment culture of sample MGS-ElMAX(UA) from oil contaminated site at the El-Max
Species
Start position on genome 1962
End posion on genome 1886
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cggggactgg
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCGGACCGCTCATAACGGTTTGGTCGCAGGTTCGAG
TCCTGCCGGGCCCACCA
Downstream region at tRNA end position 
gctttcgtcc
Secondary structure (Cloverleaf model)
>WENV170016182	Met	CAT
                   g      ACCA gctttcgtcc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     TGGTC
                    G + T
                    A - T
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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