The detailed information of tRNA gene sequence


Sequence ID>WENV170016199
Genome IDAZIJ01015852
Search identical group
Phylum/Class[AZIJ] marine sediment metagenome; enrichment culture of sample MGS-ElMAX(UA) from oil contaminated site at the El-Max
Species
Start position on genome 3543
End posion on genome 3468
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gttacgcaac
tRNA gene sequence 
AGGCCAGTAGCTCAACTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGGGGGTTCGAGT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
ttcctaatcg
Secondary structure (Cloverleaf model)
>WENV170016199	Trp	CCA
                   c      GCCA ttcctaatcg
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      C A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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