The detailed information of tRNA gene sequence


Sequence ID>WENV170016224
Genome IDAZIJ01017497
Search identical group
Phylum/Class[AZIJ] marine sediment metagenome; enrichment culture of sample MGS-ElMAX(UA) from oil contaminated site at the El-Max
Species
Start position on genome 4466
End posion on genome 4390
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaatttatta
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGTTAGAGCAGCGGACTCATAATCCGTTGGTCCCGTGTTCAAG
TCACGGTGGGCCCACCA
Downstream region at tRNA end position 
tataaaacaa
Secondary structure (Cloverleaf model)
>WENV170016224	Met	CAT
                   a      ACCA tataaaacaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     G G C A C     A
      T G A        A      | | | | |     A
    T       C T C G       C C G T G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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