The detailed information of tRNA gene sequence


Sequence ID>WENV170016245
Genome IDAZIJ01018133
Search identical group
Phylum/Class[AZIJ] marine sediment metagenome; enrichment culture of sample MGS-ElMAX(UA) from oil contaminated site at the El-Max
Species
Start position on genome 2820
End posion on genome 2733
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgcctcaaaa
tRNA gene sequence 
GGAGGGGTGGCTGAGTGGCCGAAAGCACCGGTCTTGAAAACCGGCGACGGGAGACCGTCC
CAGGGTTCGAATCCCTGCCCCTCCGCCA
Downstream region at tRNA end position 
tttatcccca
Secondary structure (Cloverleaf model)
>WENV170016245	Ser	TGA
                   a      GCCA tttatcccca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       C A G G G     C
    G         | | |                 T T
    C       A A G C
      C G A        A     CGACGGGAGACCGTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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