The detailed information of tRNA gene sequence


Sequence ID>WENV170016258
Genome IDAZIJ01018495
Search identical group
Phylum/Class[AZIJ] marine sediment metagenome; enrichment culture of sample MGS-ElMAX(UA) from oil contaminated site at the El-Max
Species
Start position on genome 417
End posion on genome 328
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgcttcatgc
tRNA gene sequence 
GGAGGTGTGGCCGAGTGGTTGAAGGCAGCGGTCTTGAAAACCGCCGAAGGGGAAACTCTT
CCGTGAGTTCGAATCTCACCGCCTCCGCCA
Downstream region at tRNA end position 
tctgcatagc
Secondary structure (Cloverleaf model)
>WENV170016258	Ser	TGA
                   c      GCCA tctgcatagc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G A G     C
    G         | | |                 T T
    T       A G G C
      T G A        A     CGAAGGGGAAACTCTTCC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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