The detailed information of tRNA gene sequence


Sequence ID>WENV170016329
Genome IDAZIK01000202
Search identical group
Phylum/Class[AZIK] marine sediment metagenome; enrichment culture of sample MGS-ANC(AMM) from oil contaminated site at the Ancona Port
Species
Start position on genome 11548
End posion on genome 11638
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gccgtgaact
tRNA gene sequence 
GGAGAGATGGCCGAGTGGCTGAAGGCGCACCCCTGCTAAGGGTGTATAGGTTTATACCCT
ATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ctttttctgc
Secondary structure (Cloverleaf model)
>WENV170016329	Ser	GCT
                   t      GCCA ctttttctgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATAGGTTTATACCCTATC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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