The detailed information of tRNA gene sequence


Sequence ID>WENV170016434
Genome IDAZIK01004853
Search identical group
Phylum/Class[AZIK] marine sediment metagenome; enrichment culture of sample MGS-ANC(AMM) from oil contaminated site at the Ancona Port
Species
Start position on genome 141
End posion on genome 52
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gccgttgtta
tRNA gene sequence 
GGTGAGTTGGCCGAGTGGCTGAAGGCGCGCCCCTGCTAAGGGCGTATAGGGGAAACTCTA
TCGAGGGTTCGAATCCCTCACTCACCGCCA
Downstream region at tRNA end position 
ttttgatata
Secondary structure (Cloverleaf model)
>WENV170016434	Ser	GCT
                   a      GCCA ttttgatata
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATAGGGGAAACTCTATC
                    C - G
                    G - C
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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